Support #875
Updated by Daniel Curtis over 7 years ago
This is a guide for setting up FlowCytometryTools on FreeBSD 10.
h2. Prepare the Environment
* Make sure the system is up to date:
<pre>
pkg update && pkg upgrade
</pre>
* Setup a Python development envirnoment, refer to issue #874
h2. Install FlowCytometryTools
* Install a few dependencies:
<pre>
pkg install git freetype2 png py27-matplotlib
</pre>
*NOTE*: To use the FlowCytometryTools GUI, wxPython must be installed as well:
<pre>
pkg install py27-wxPython28
</pre>
* Switch to the pydev user:
<pre>
su - pydev
</pre>
* Create the FlowCytometryTools virtualenv:
<pre>
virtualenv FCT
</pre>
* Activate the virtualenv:
<pre>
source ./FCT/bin/activate
</pre>
* Clone the FlowCytometryTools from GitHub:
<pre>
git clone https://github.com/eyurtsev/FlowCytometryTools.git
cd FlowCytometryTools
</pre>
* Run the install script:
<pre>
python setup.py install
</pre>
h2. Resources
* https://github.com/eyurtsev/FlowCytometryTools
* https://pypi.python.org/pypi/FlowCytometryTools
* http://eyurtsev.github.io/FlowCytometryTools/install.html
* http://eyurtsev.github.io/FlowCytometryTools/tutorial.html